3DMET: B01431

Universal description

 
Entry B01431
Name 5-Amino-6-(5'-phosphoribosylamino)uracil; 5-Amino-6-(ribosylamino)-2,4-(1H,3H)-pyrimidinedione 5'-phosphate; 5-Amino-6-(5-phosphoribosylamino)uracil
Formula C9H15N4O9P
Weight 354.058
Canonical SMILES C[C@@H](Nc1ccc(C[C@H](O)[C@H](O)[C@H](O)CO[C@H]2O[C@H](CO[P@](=O)([OH-])O[C@@H](CCC(=O)[OH-])C(=O)[OH-])[C@@H](O)[C@H]2O)cc1)[C@H]3[C@H](C)Nc4nc(N)[nH]c(=O)c4N3C=O
InChI 1/C31H45N6O17P/c1-13(22-14(2)34-27-23(37(22)12-38)28(46)36-31(32)35-27)33-16-5-3-15(4-6-16)9-17(39)24(43)18(40)10-51-30-26(45)25(44)20(53-30)11-52-55(49,50)54-19(29(47)48)7-8-21(41)42/h3-6,12-14,17-20,22,24-26,30,33,39-41,43-45,47,49H,7-11H2,1-2H3,(H4,32,34,35,36,46)/q-3/t13-,14+,17+,18-,19+,20-,22+,24+,25-,26-,30+/m1/s1
COMPOUND C01268
 

2D and 3D structures/descriptors

 
2D Structure

3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge -3
Weight 801.676
LogP(o/w) -3.267
SlogP -7.91223
LogS -3.09317
SMR 17.5951
TPSA (A2) 364.32
Number of rings 4
Number of atoms 97
   Chiral atoms 12
   H-bond acceptor 12
   H-bond donor 9
   Acidic atoms 6
   Basic atoms 0
   Aromatic atoms 6
    Heavy atoms 55
Number of bonds 100
   Single bonds 88
   Rotatable single bonds 20
   Double bonds 6
   Triple bonds 0
   Aromatic bonds 6
Volume (A3) 676.875
ASA (A2) 1164.11
VSA (A2) 761.259
Density 1.18885
Diameter 30
Dipole (debye) 0
Globularity 0.0317649
Potential energy (kcal/mol) 29.8797
   angle bend energy 64.6759
   electrostatic energy -193.43
   non-bond energy -103.277
   out-of-plane energy 0.261024
   solvation energy -506.499
   bond stretch-bend energy -7.20903
   torsion energy 41.2296
   Van del Waals energy 90.1537

Three-dimensionalizing operation

converted by CONCORD standalone
confirmed by InChI
status Completely same chiraliry