3DMET: B01187

Universal description

 
Entry B01187
Name D-Ribulose 5-phosphate
Formula C5H11O8P
Weight 230.019
Canonical SMILES OCC(=O)[C@H](O)[C@H](O)COP(=O)([OH-])[OH-]
InChI 1/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-11H,1-2H2/q-2/t4-,5+/m1/s1
CASRN® 551-85-9
COMPOUND C00199
 

2D and 3D structures/descriptors

 
2D Structure

3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge -2
Weight 228.093
LogP(o/w) -3.676
SlogP -4.9553
LogS 0.95765
SMR 3.69784
TPSA (A2) 138.2
Number of rings 0
Number of atoms 23
   Chiral atoms 2
   H-bond acceptor 5
   H-bond donor 3
   Acidic atoms 3
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 14
Number of bonds 22
   Single bonds 21
   Rotatable single bonds 6
   Double bonds 1
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 171.875
ASA (A2) 405.849
VSA (A2) 220.869
Density 1.33882
Diameter 8
Dipole (debye) 0
Globularity 0.055868
Potential energy (kcal/mol) -111.446
   angle bend energy 24.7354
   electrostatic energy -159.934
   non-bond energy -153.276
   out-of-plane energy 0.0017286
   solvation energy -337.763
   bond stretch-bend energy -1.72146
   torsion energy 8.0837
   Van del Waals energy 6.65834

Three-dimensionalizing operation

converted by CONCORD standalone
confirmed by InChI
status Completely same chiraliry