3DMET: B05591

Universal description

 
Entry B05591
Name Avermectin B2a monosaccharide
Formula C41H62O12
Weight 746.4241
Canonical SMILES CCC(C)[C@H]1O[C@]2(C[C@H](O)[C@@H]1C)C[C@@H]3C[C@@H](CC=C(C)[C@@H](O[C@H]4C[C@H](OC)[C@@H](O)[C@H](C)O4)[C@@H](C)C=CC=C5CO[C@@H]6[C@H](O)C(=C[C@@H](C(=O)O3)[C@@]65O)C)O2
InChI 1/C41H62O12/c1-9-21(2)37-25(6)31(42)19-40(53-37)18-29-16-28(52-40)14-13-23(4)36(51-33-17-32(47-8)35(44)26(7)49-33)22(3)11-10-12-27-20-48-38-34(43)24(5)15-30(39(45)50-29)41(27,38)46/h10-13,15,21-22,25-26,28-38,42-44,46H,9,14,16-20H2,1-8H3/b11-10+,23-13+,27-12+/t21-,22-,25-,26-,28+,29-,30-,31-,32-,33-,34+,35-,36-,37+,38+,40-,41+/m0/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11973.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 746.934982
LogP(o/w) 4.812
SlogP 4.0371
LogS -5.44678
SMR 19.41672
TPSA (A2) 162.6
Number of rings 6
Number of atoms 115
   Chiral atoms 17
   H-bond acceptor 11
   H-bond donor 4
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 53
Number of bonds 120
   Single bonds 115
   Rotatable single bonds 5
   Double bonds 5
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 731
ASA (A2) 1024.261
VSA (A2) 786.155488
Density 1.021798882
Diameter 17
Dipole (debye) 1.153691634
Globularity 0.141797627
Potential energy (kcal/mol) 359198.0195
   angle bend energy 359093.005
   electrostatic energy -359068.9595
   non-bond energy 359128.9814
   out-of-plane energy 359055.1532
   solvation energy 359053.6496
   bond stretch-bend energy 359056.5192
   torsion energy 359071.7152
   Van del Waals energy 359143.0632

Three-dimensionalizing operation

converted by CORINA
confirmed by canonical SMILES
judged as Undefined chiral atoms