3DMET: B05589

Universal description

 
Entry B05589
Name Avermectin B2a aglycone
Formula C34H50O9
Weight 602.3455
Canonical SMILES CCC(C)[C@H]1O[C@]2(C[C@H](O)[C@@H]1C)C[C@@H]3C[C@@H](CC=C(C)[C@@H](O)[C@@H](C)C=CC=C4CO[C@@H]5[C@H](O)C(=C[C@@H](C(=O)O3)[C@@]54O)C)O2
InChI 1/C34H50O9/c1-7-18(2)30-22(6)27(35)16-33(43-30)15-25-14-24(42-33)12-11-20(4)28(36)19(3)9-8-10-23-17-40-31-29(37)21(5)13-26(32(38)41-25)34(23,31)39/h8-11,13,18-19,22,24-31,35-37,39H,7,12,14-17H2,1-6H3/b9-8+,20-11+,23-10+/t18-,19-,22-,24+,25-,26-,27-,28-,29+,30+,31+,33-,34+/m0/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11971.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 602.7649855
LogP(o/w) 4.066
SlogP 3.502
LogS -4.46031
SMR 15.95452
TPSA (A2) 134.91
Number of rings 5
Number of atoms 93
   Chiral atoms 13
   H-bond acceptor 8
   H-bond donor 4
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 43
Number of bonds 97
   Single bonds 92
   Rotatable single bonds 2
   Double bonds 5
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 592
ASA (A2) 847.1268754
VSA (A2) 634.829558
Density 1.018184098
Diameter 14
Dipole (debye) 0.9227051844
Globularity 0.1331446685
Potential energy (kcal/mol) 116.102016
   angle bend energy 34.51143254
   electrostatic energy -16.97757561
   non-bond energy 59.5225094
   out-of-plane energy 0.1616468223
   solvation energy -7.026426183
   bond stretch-bend energy 1.090353145
   torsion energy 10.1493974
   Van del Waals energy 76.500085

Three-dimensionalizing operation

converted by CORINA
confirmed by canonical SMILES
judged as Undefined chiral atoms