3DMET: B05559

Universal description

 
Entry B05559
Name dTDP-6-deoxy-D-allose
Formula C16H26N2O15P2
Weight 548.0808
Canonical SMILES C[C@H]1OC(OP(=O)(O)OP(=O)(O)OC[C@H]2O[C@H](C[C@@H]2O)n3cc(C)c(=O)[nH]c3=O)[C@H](O)[C@H](O)[C@@H]1O
InChI 1/C16H26N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-13,15,19-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)/t7-,8+,9-,10-,11-,12-,13-,15u/m1/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11912.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 548.3309906
LogP(o/w) -4.608
SlogP -4.1444
LogS -0.10505
SMR 10.71745
TPSA (A2) 251.08
Number of rings 3
Number of atoms 61
   Chiral atoms 10
   H-bond acceptor 14
   H-bond donor 9
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 35
Number of bonds 63
   Single bonds 60
   Rotatable single bonds 8
   Double bonds 3
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 415
ASA (A2) 769.7838807
VSA (A2) 478.8815904
Density 1.321279496
Diameter 18
Dipole (debye) 1.424787799
Globularity 0.03258274532
Potential energy (kcal/mol) -42.19829771
   angle bend energy 66.29547562
   electrostatic energy -166.2047207
   non-bond energy -119.8810517
   out-of-plane energy 0.00785539558
   solvation energy -10.69519558
   bond stretch-bend energy 0.1951411495
   torsion energy -0.8876094512
   Van del Waals energy 46.32366899

Three-dimensionalizing operation

converted by CONCORD standalone
confirmed by InChI
judged as Undefined chiral atoms