3DMET: B05182

Universal description

 
Entry B05182
Name Lauroyl-KDO2-lipid IV(A)
Formula C96H176N2O38P2
Weight 2027.1376
Canonical SMILES CCCCCCCCCCCC(O)CC(=O)N[C@H]1[C@@H](OP(=O)(O)O)O[C@H](CO[C@@H]2O[C@H](CO[C@@]3(C[C@@H](O[C@@]4(C[C@@H](O)[C@@H](O)[C@H](O4)[C@H](O)CO)C(=O)O)[C@@H](O)[C@H](O3)[C@H](O)CO)C(=O)O)[C@@H](OP(=O)(O)O)[C@H](OC(=O)CC(O)CCCCCCCCCCC)[C@H]2NC(=O)CC(CCCCCCCCCCC)OC(=O)CCCCCCCCCCC)[C@@H](O)[C@@H]1OC(=O)CC(O)CCCCCCCCCCC
InChI 1/C96H176N2O38P2/c1-6-11-16-21-26-31-36-41-46-51-66(101)56-76(107)97-81-89(130-79(110)57-67(102)52-47-42-37-32-27-22-17-12-7-2)85(114)74(128-92(81)136-138(122,123)124)64-125-91-82(98-77(108)59-69(54-49-44-39-34-29-24-19-14-9-4)127-78(109)55-50-45-40-35-30-25-20-15-10-5)90(131-80(111)58-68(103)53-48-43-38-33-28-23-18-13-8-3)88(135-137(119,120)121)75(129-91)65-126-95(93(115)116)61-73(84(113)87(133-95)72(106)63-100)132-96(94(117)118)60-70(104)83(112)86(134-96)71(105)62-99/h66-75,81-92,99-106,112-114H,6-65H2,1-5H3,(H,97,107)(H,98,108)(H,115,116)(H,117,118)(H2,119,120,121)(H2,122,123,124)/t66?,67?,68?,69?,70-,71-,72-,73-,74-,75-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,95-,96-/m1/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C06251.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 2028.387956
LogP(o/w) 13.79974
SlogP 8.5436
LogS -25.0024
SMR 50.1908
TPSA (A2) 632.36
Number of rings 4
Number of atoms 314
   Chiral atoms 24
   H-bond acceptor 35
   H-bond donor 23
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 138
Number of bonds 317
   Single bonds 310
   Rotatable single bonds 81
   Double bonds 7
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 1951.5
ASA (A2) 2887.26651
VSA (A2) 2217.612783
Density 1.039399415
Diameter 39
Dipole (debye) 1.669111557
Globularity 0.1760690941
Potential energy (kcal/mol) -30.20115473
   angle bend energy 56.59525217
   electrostatic energy -212.3881521
   non-bond energy -25.90722262
   out-of-plane energy 0.3375103849
   solvation energy 184.107811
   bond stretch-bend energy 0.9914293286
   torsion energy -85.50264984
   Van del Waals energy 186.4809295

Three-dimensionalizing operation

converted by CORINA
confirmed by InChI
judged as Undefined chiral atoms