3DMET: B04469

Universal description

 
Entry B04469
Name Premithramycin A1
Formula C27H28O12
Weight 544.1581
Canonical SMILES CO[C@H]1[C@@H]2Cc3cc4cc(O)cc(O)c4c(O)c3C(=O)[C@]2(O[C@H]5C[C@@H](O)[C@H](O)[C@@H](C)O5)C(=O)C(=C1O)C(=O)C
InChI 1/C27H28O12/c1-9(28)18-23(34)24(37-3)14-6-12-4-11-5-13(29)7-15(30)19(11)22(33)20(12)26(36)27(14,25(18)35)39-17-8-16(31)21(32)10(2)38-17/h4-5,7,10,14,16-17,21,24,29-34H,6,8H2,1-3H3/t10-,14+,16-,17+,21-,24+,27-/m1/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C12384.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 544.5089865
LogP(o/w) 1.177
SlogP 0.92247
LogS -4.3318
SMR 13.13883
TPSA (A2) 200.28
Number of rings 5
Number of atoms 67
   Chiral atoms 7
   H-bond acceptor 12
   H-bond donor 8
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 10
    Heavy atoms 39
Number of bonds 71
   Single bonds 56
   Rotatable single bonds 4
   Double bonds 4
   Triple bonds 0
   Aromatic bonds 11
Volume (A3) 468.875
ASA (A2) 750.6406361
VSA (A2) 511.402702
Density 1.16130949
Diameter 14
Dipole (debye) 1.390985575
Globularity 0.1590294097
Potential energy (kcal/mol) 140.2426004
   angle bend energy 26.82235568
   electrostatic energy -0.3840904742
   non-bond energy 75.56913594
   out-of-plane energy 0.007919249992
   solvation energy -32.93816357
   bond stretch-bend energy 4.025729052
   torsion energy 19.78727968
   Van del Waals energy 75.95322642

Three-dimensionalizing operation

converted by CONCORD standalone
confirmed by InChI
judged as Completely same chiraliry