3DMET: B04403

Universal description

 
Entry B04403
Name Narbonolide
Formula C20H32O5
Weight 352.225
Canonical SMILES CC[C@H]1OC(=O)[C@H](C)C(=O)[C@H](C)[C@@H](O)[C@@H](C)C[C@@H](C)C(=O)C=C[C@H]1C
InChI 1/C20H32O5/c1-7-17-11(2)8-9-16(21)12(3)10-13(4)18(22)14(5)19(23)15(6)20(24)25-17/h8-9,11-15,17-18,22H,7,10H2,1-6H3/b9-8+/t11-,12-,13+,14-,15-,17-,18+/m1/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11997.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 352.4709916
LogP(o/w) 3.038
SlogP 2.9477
LogS -2.58258
SMR 9.57688
TPSA (A2) 80.67
Number of rings 1
Number of atoms 57
   Chiral atoms 7
   H-bond acceptor 4
   H-bond donor 1
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 25
Number of bonds 57
   Single bonds 53
   Rotatable single bonds 1
   Double bonds 4
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 365.5
ASA (A2) 560.6902563
VSA (A2) 405.4976712
Density 0.9643529195
Diameter 10
Dipole (debye) 1.714593759
Globularity 0.1697968237
Potential energy (kcal/mol) 55.18942222
   angle bend energy 15.93508489
   electrostatic energy -5.961548074
   non-bond energy 29.08992584
   out-of-plane energy 0.1468554644
   solvation energy -16.35763397
   bond stretch-bend energy 0.7590236937
   torsion energy 2.72983417
   Van del Waals energy 35.05147391

Three-dimensionalizing operation

converted by CORINA
confirmed by InChI
judged as Completely same chiraliry