3DMET: B04390

Universal description

 
Entry B04390
Name 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 'ND'1a'ND' aglycone
Formula C34H48O7
Weight 568.34
Canonical SMILES CCC(C)[C@H]1O[C@@]2(C[C@@H]3C[C@@H](CC=C(C)[C@@H](O)[C@@H](C)C=CC=C(C)[C@]4(O)CC(=O)C(=C[C@H]4C(=O)O3)C)O2)C=C[C@@H]1C
InChI 1/C34H48O7/c1-8-20(2)31-23(5)14-15-33(41-31)18-27-17-26(40-33)13-12-22(4)30(36)21(3)10-9-11-25(7)34(38)19-29(35)24(6)16-28(34)32(37)39-27/h9-12,14-16,20-21,23,26-28,30-31,36,38H,8,13,17-19H2,1-7H3/b10-9+,22-12+,25-11+/t20-,21-,23-,26+,27-,28-,30-,31+,33+,34+/m0/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11977.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 568.7509863
LogP(o/w) 5.154
SlogP 5.5266
LogS -4.77874
SMR 15.76126
TPSA (A2) 102.29
Number of rings 4
Number of atoms 89
   Chiral atoms 10
   H-bond acceptor 6
   H-bond donor 2
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 41
Number of bonds 92
   Single bonds 85
   Rotatable single bonds 2
   Double bonds 7
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 583.375
ASA (A2) 847.9881545
VSA (A2) 624.8171848
Density 0.9749320541
Diameter 14
Dipole (debye) 0.8932101898
Globularity 0.1831380885
Potential energy (kcal/mol) 83.81658844
   angle bend energy 21.93104902
   electrostatic energy -3.925362666
   non-bond energy 68.15466574
   out-of-plane energy 0.123878504
   solvation energy -8.546500124
   bond stretch-bend energy 1.364186483
   torsion energy -19.80333633
   Van del Waals energy 72.08002841

Three-dimensionalizing operation

converted by CORINA
confirmed by InChI
judged as Completely same chiraliry