3DMET: B04388

Universal description

 
Entry B04388
Name 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 'ND'1b'ND' aglycone
Formula C33H46O7
Weight 554.3244
Canonical SMILES CC(C)[C@H]1O[C@@]2(C[C@@H]3C[C@@H](CC=C(C)[C@@H](O)[C@@H](C)C=CC=C(C)[C@]4(O)CC(=O)C(=C[C@H]4C(=O)O3)C)O2)C=C[C@@H]1C
InChI 1/C33H46O7/c1-19(2)30-22(5)13-14-32(40-30)17-26-16-25(39-32)12-11-21(4)29(35)20(3)9-8-10-24(7)33(37)18-28(34)23(6)15-27(33)31(36)38-26/h8-11,13-15,19-20,22,25-27,29-30,35,37H,12,16-18H2,1-7H3/b9-8+,21-11+,24-10+/t20-,22-,25+,26-,27-,29-,30+,32+,33+/m0/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C11961.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 554.7239866
LogP(o/w) 4.712
SlogP 5.1365
LogS -4.26352
SMR 15.29956
TPSA (A2) 102.29
Number of rings 4
Number of atoms 86
   Chiral atoms 9
   H-bond acceptor 6
   H-bond donor 2
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 0
    Heavy atoms 40
Number of bonds 89
   Single bonds 82
   Rotatable single bonds 1
   Double bonds 7
   Triple bonds 0
   Aromatic bonds 0
Volume (A3) 566
ASA (A2) 821.8795568
VSA (A2) 607.7848111
Density 0.9800777162
Diameter 13
Dipole (debye) 0.8935131026
Globularity 0.1533260104
Potential energy (kcal/mol) 82.7325531
   angle bend energy 21.35986586
   electrostatic energy -3.931084153
   non-bond energy 66.54359537
   out-of-plane energy 0.1255748329
   solvation energy -8.760590357
   bond stretch-bend energy 1.341735925
   torsion energy -18.20640031
   Van del Waals energy 70.47467952

Three-dimensionalizing operation

converted by CORINA
confirmed by InChI
judged as Completely same chiraliry