3DMET: B01874

Universal description

 
Entry B01874
Name L-2-Aminoadipate adenylate; 5-Adenylyl-2-aminoadipate; alpha-Aminoadipoyl-C6-AMP
Formula C16H23N6O10P
Weight 490.1213
Canonical SMILES N[C@@H](CCCC(=O)OP(=O)(O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(=O)O
InChI 1/C16H23N6O10P/c17-7(16(26)27)2-1-3-9(23)32-33(28,29)30-4-8-11(24)12(25)15(31-8)22-6-21-10-13(18)19-5-20-14(10)22/h5-8,11-12,15,24-25H,1-4,17H2,(H,26,27)(H,28,29)(H2,18,19,20)/t7-,8+,11+,12+,15+/m0/s1
 

2D and 3D structures/descriptors

 
2D Structure of KEGG

Link to COMPOUND:C05560.
3D structure (visualized by Jmol)
 

2D descriptors

3D descriptors

Formal charge 0
Weight 490.3659916
LogP(o/w) -5.62867
SlogP -2.7046
LogS -1.33363
SMR 10.6415
TPSA (A2) 255.46
Number of rings 3
Number of atoms 56
   Chiral atoms 6
   H-bond acceptor 13
   H-bond donor 8
   Acidic atoms 0
   Basic atoms 0
   Aromatic atoms 9
    Heavy atoms 33
Number of bonds 58
   Single bonds 46
   Rotatable single bonds 10
   Double bonds 2
   Triple bonds 0
   Aromatic bonds 10
Volume (A3) 396
ASA (A2) 767.626637
VSA (A2) 465.999844
Density 1.238297959
Diameter 18
Dipole (debye) 0.656453974
Globularity 0.04369559879
Potential energy (kcal/mol) 95.10146713
   angle bend energy 41.37718634
   electrostatic energy -43.79950377
   non-bond energy -9.844712497
   out-of-plane energy 40.97048354
   solvation energy -51.50255305
   bond stretch-bend energy -0.05802365994
   torsion energy 3.070103426
   Van del Waals energy 33.95479128

Three-dimensionalizing operation

converted by CONCORD standalone
confirmed by InChI
judged as Completely same chiraliry